BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019G09LP1|AL427529
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1516 0.0
3x_Contig66 108 3e-23
>3x_Contig1530
Length = 6216
Score = 1516 bits (761), Expect = 0.0
Identities = 925/982 (94%), Gaps = 2/982 (0%)
Strand = Plus / Plus
Query: 6 gatcgtgacgtcgtcggatggatgggmgtcagagcatagcggtcgggacccgaaagacgg 65
|||| ||| ||| |||||||||| | || |||||||||| || ||||||||||||| ||
Sbjct: 2792 gatcctgatgtcttcggatggatttgagtaagagcatagctgttgggacccgaaagatgg 2851
Query: 66 ggaacgatgccggaatagggtgaagccagaggaaacgcggggggaggcgcggagcggggc 125
|||| ||||| |||||||||||||||||||||||| | || |||||| || ||||| |
Sbjct: 2852 tgaactatgcctgaatagggtgaagccagaggaaactctggtggaggctcgtagcggttc 2911
Query: 126 ggacgtgcaaagcgakcggcgaatttgggtagaggggcgaaagactaaacgaaccagcta 185
|||||||||| ||| || |||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 2912 tgacgtgcaaatcgatcgtcgaatttgggtataggggcgaaagactaatcgaaccatcta 2971
Query: 186 ggagcggggtccggccgaagtgtccctcaggatagcagaagcgcggatcagtgttatgag 245
| ||| || ||| |||||||| |||||||||||||||||||| || |||||| |||||||
Sbjct: 2972 gtagctggttcctgccgaagtttccctcaggatagcagaagctcgtatcagttttatgag 3031
Query: 246 ggaaagcgaatgagtagagggaccggggttgaaatgaccttgacctattctcaaacttta 305
| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3032 gtaaagcgaatgattagaggtaccggggttgaaatgaccttgacctattctcaaacttta 3091
Query: 306 aatatgtaagamgtccttgttgcgtaaatgaacgtggacatttgaangaagagcctnnag 365
||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||| | ||
Sbjct: 3092 aatatgtaagaagtccttgttgcttaattgaacgtggacatttgaatgaagagcttttag 3151
Query: 366 tgggccactcttggtaagcagaactggcgatgcgggatgaaccgaacgtggagttaaggt 425
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 tgggccatttttggtaagcagaactggcgatgcgggatgaaccgaacgtggagttaaggt 3211
Query: 426 gccggaatacacgctcatcagacaccacaaaaggtgttagttcatctagacagccggacg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 gccggaatacacgctcatcagacaccacaaaaggtgttagttcatctagacagccggacg 3271
Query: 486 gtggccatggaagtcggaatccgctaaggagtgtgttacaactcaccggccgaatgaact 545
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3272 gtggccatggaagtcggaatccgctaaggagtgtgtaacaactcaccggccgaatgaact 3331
Query: 546 agccctgaaaatggatggcgctcaagcgtgttacctatactccaccgtcagggttaatat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3332 agccctgaaaatggatggcgctcaagcgtgttacctatactccaccgtcagggttaatat 3391
Query: 606 gatgccctgacgagtaggcaggcgtggaggtcagtkacgaagcctaggctgtaaagctgg 665
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 3392 gatgccctgacgagtaggcaggcgtggaggtcagtgacgaagcctaggctgtaaagct-g 3450
Query: 666 ggtagaacggcctctagtgcagatcttggtggtagtagcaaatattcaaatgagaacttt 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3451 ggtagaacggcctctagtgcagatcttggtggtagtagcaaatattcaaatgagaacttt 3510
Query: 726 gaagactgaagtggggaaagg-tccacgtcaacagcagtmggacgtgggttagtcgatcc 784
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 3511 gaagactgaagtggggaaaggttccacgtcaacagcagttggacgtgggttagtcgatcc 3570
Query: 785 taagagatggggaagctccgtttcaaaggcctaattttctaggccaccatcgaaagggaa 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3571 taagagatggggaagctccgtttcaaaggcctaattttctaggccaccatcgaaagggaa 3630
Query: 845 tccggttaatattccggaacctggatatggattcttcacggtaacgtaactgaatgtkga 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3631 tccggttaatattccggaacctggatatggattcttcacggtaacgtaactgaatgtgga 3690
Query: 905 gacgtcggcgcgaccctggggaggagtwatcttttcttcttaacagcttatcaccccgga 964
||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3691 gacgtcggcgcgagccctgggaggagttatcttttcttcttaacagcttatcaccccgga 3750
Query: 965 attggtttatccggagaggggg 986
||||||||||||||||||||||
Sbjct: 3751 attggtttatccggagaggggg 3772
>3x_Contig66
Length = 1023
Score = 108 bits (54), Expect = 3e-23
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 933 atcttttcttcttaacagcttatcaccccggaattggtttatccggagaggggg 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atcttttcttcttaacagcttatcaccccggaattggtttatccggagaggggg 426
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3324
Number of Sequences: 1807
Number of extensions: 3324
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 2
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)